Typing tool

Sapovirus genogroup II capsid (VP1)   GenBank
1 GII.1
 (16)
Bristol_AJ249939
2 Chiba020003_AJ606692
3 Ehime2K-1948_AJ786351
4 London29845_U95645
5 Lyon598_AJ271056
6 Mc2_AY237419
7 Nashville9343_MG012444
8 Nashville9346_MG012445
9 Nashville9353_MG012404
10 Nashville9360_MG012402
11 Nashville9385_MG012409
12 Nashville9422_MG012403
13 Nashville9510_MG012406
14 Nashville9511_MG012405
15 Nashville9525_MG012407
16 Nashville9691-2_MG012408
17 GII.2
 (8)
Chiba990727_AJ606689
18 Mc10_AY237420
19 Mex340_AF435812
20 Nashville9331_MG012411
21 Nashville9393_MG012412
22 Nashville9521_MG012410
23 Nashville9795_MG012413
24 OB2015_2158
25 GII.3
 (13)
13-3-2_KM092509
26 20082029_AB630068
27 C12_AY603425
28 Chiba040507_AJ786350
29 Kushiro5_AB455793
30 Leon6701_MG012414
31 Leon6708_MG012416
32 Nashville9354_MG012419
33 Nashville9513_MG012418
34 Nashville9517_MG012415
35 Nayoro4_AB455794
36 Pampas1856_MG012417
37 Sydney53_DQ104360
38 GII.4
 (3)
Kumamoto6_AB429084
39 PHL-TGO12-028_KP067444
40 Pampas1873_MG012446
41 GII.5
 (6)
Cruiseship_AY289804
42 Nashville9349_MG012447
43 Nashville9387_MG012449
44 Pampas1868_MG012451
45 SantaRosa3693_MG012450
46 SantaRosa3812_MG012448
47 GII.6 Sakaeo15_AY646855
48 GII.7 20072248_AB630067
49 GII.8
 (2)
Monterey6283_MG012453
50 Monterey6284_MG012452
Sapovirus genogroup II capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: March 1, 2021