Typing tool

Sapovirus genogroup I capsid (VP1)   GenBank
1 GI.1
 (19)
Chanthaburi74_AY646854
2 Dresden_AY694184
3 Hunan_KX980412
4 Manchester_X86560
5 Mc114_AY237422
6 N21_AY237423
7 Nashville9427_MG012397
8 Nashville9432_MG012437
9 Nashville9478_MG012438
10 Nashville9491_MG012400
11 Nashville9691-1_MG012435
12 NongKhai50_AY646853
13 Pampas1845_MG012398
14 Pampas1863_MG012439
15 Pampas1870_MG012436
16 Portland3639_MG012399
17 SapporoMT-2010_HM002617
18 SeoulROK62_KP298674
19 Zhejiang1_KT327081
20 GI.2
 (7)
BE-HPI01_JX993277
21 BR-DF01_AB614356
22 Nashville9411_MG012440
23 Oakland3023_MG012442
24 Oakland6371_MG012441
25 Parkville_U73124
26 Potsdam_AF294739
27 GI.3
 (3)
Chiba010658_AJ606696
28 OB20151927_MG012401
29 Stockholm318_AF194182
30 GI.4 Chiba000496_AJ606693
31 GI.5
 (3)
Ehime2K-814_AJ606698
32 Ehime643_DQ366345
33 Yokote1_AB253740
34 GI.6
 (4)
Chiba000764_AJ606694
35 Nashville9367_MG012443
36 Nichinan_AB455803
37 Tokyo08-2439_AB622435
38 GI.7
 (2)
D1714_AB522390
39 Ehime041680_AB258418
Sapovirus genogroup I capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: March 1, 2021