Typing tool

Norovirus genogroup I polymerase (RdRp)   GenBank
1 GI.P1
 (4)
Norwalk_M87661
2 Gothenburg_EU085529  
3 SRSV-KY-8989J_L23828  
4 V1622-06_AB447406  
5 GI.P2
 (2)
Southampton_L07418
6 Leuven_FJ515294  
7 GI.P3
 (3)
VA98115_AY038598
8 CHDC116_JX846929  
9 ShimizuKK2866_KJ196292  
10 GI.P4
 (4)
Chiba407_AB042808
11 Beijing55169_GQ856475  
12 Groningen_LN854563  
13 Queensarmsleeds92_AJ313030  
14 GI.P5
 (2)
Siklos-HUN5407_KJ402295
15 AppalachicolaBay318_AF414406  
16 GI.P6
 (2)
BS5(Hesse)_AF093797
17 14-BC-1_KP027330  
18 GI.P7
 (3)
AlbertaEI404_KU311161  
19 LillaEdetS5b_JN603251  
20 Providence_JN899243  
21 GI.P8
 (2)
NagoyaKY531_KJ196298
22 KolkataL8775_AB290150  
23 GI.P9
 (3)
CAIQ12110628_KF586507
24 LillaEdetS48_JN183159  
25 Vancouver730_HQ637267  
26 GI.P10
 (2)
DesertShield395_U04469
27 Beijing55042_GQ856473  
28 GI.P11
 (3)
Beijing53997_GQ856463
29 Beijing55063_GQ856464  
30 Hiroshima48-938_AB354289  
31 GI.P12
 (2)
SzUG1_AB039774
32 Yiwu-CB1_MH443711  
33 GI.P13
 (4)
Vesoul576_EF529738
34 Beijing54108_GQ856470  
35 Beijing54114_GQ856471  
36 Beijing54660_GQ856472  
37 GI.P14
 (2)
Otofuke_AB187514
38 Muenster702_KM289169  
39 GI.PNA1 WUG1_AB081723
40 GI.PNA2
 (2)
Dhaka1882_MH130046
41 NizhnyNovgorod_FJ383816  
42 GI.PNA3 V170707_AB447414
43 GI.PNA4 No20-Saitama-98-17_LC342057
Norovirus genogroup I polymerase phylogenetic tree

 
The tree was computed from nucleotide sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: September 21, 2019