Typing tool

Norovirus genogroup I capsid (VP1)   GenBank
1 GI.1
 (4)
Norwalk_M87661
2 Gothenburg_EU085529  
3 SRSV-KY-8989J_L23828  
4 V1622-06_AB447406  
5 GI.2
 (3)
Southampton_L07418
6 Constellation59_AF435807  
7 Leuven_FJ515294  
8 GI.3
 (15)
DesertShield395_U04469
9 Akabane991130_EF547396  
10 Beijing54108_GQ856470  
11 Beijing54114_GQ856471  
12 Beijing54660_GQ856472  
13 Beijing55042_GQ856473  
14 CHDC116_JX846929  
15 Muenster702_KM289169  
16 Otofuke_AB187514  
17 Potsdam196_AF439267  
18 ShimizuKK2866_KJ196292  
19 Stavanger_AF145709  
20 V170707_AB447414  
21 VA98115_AY038598  
22 Vesoul576_EF529738  
23 GI.4
 (5)
Chiba407_AB042808
24 Beijing55169_GQ856475  
25 Groningen_LN854563  
26 Koblenz433_AF394960  
27 Queensarmsleeds92_AJ313030  
28 GI.5
 (6)
Musgrove_AJ277614
29 AppalachicolaBay318_AF414406  
30 OC020180_LC101825  
31 Siklos-HUN5407_KJ402295  
32 SzUG1_AB039774  
33 Yiwu-CB1_MH443711  
34 GI.6
 (9)
BS5(Hesse)_AF093797
35 14-BC-1_KP027330  
36 Beijing53997_GQ856463  
37 Beijing55063_GQ856464  
38 Hiroshima48-938_AB354289  
39 No20-Saitama-98-17_LC342057  
40 Sindlesham_AJ277615  
41 VA497_AF538678  
42 WUG1_AB081723  
43 GI.7
 (8)
Winchester_AJ277609
44 AlbertaEI404_KU311161  
45 Chiba030100_AJ844469  
46 Dhaka1882_MH130046  
47 IF2036_AY675555  
48 LillaEdetS5b_JN603251  
49 NizhnyNovgorod_FJ383816  
50 Providence_JN899243  
51 GI.8
 (2)
Boxer_AF538679
52 NagoyaKY531_KJ196298  
53 GI.9
 (3)
Vancouver730_HQ637267
54 CAIQ12110628_KF586507  
55 LillaEdetS48_JN183159  
Norovirus genogroup I capsid phylogenetic tree

 
The tree was computed from amino acid sequence alignment using maximum likelihood (ML) method with PhyML software and was plotted and edited in FigTree graphical viewer.

Page last reviewed: March 1, 2021